STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_005344Polypeptide N-acetylgalactosaminyltransferase. (602 aa)    
Predicted Functional Partners:
ROHU_032313
C1GALT1-specific chaperone 1-like protein.
     
 0.804
ROHU_029891
Glyco-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A-like protein.
     
 0.803
ROHU_011710
Glyco-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B-like protein.
     
 0.802
ROHU_012316
Glyco-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like protein.
     
 0.796
ROHU_030131
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like protein; Belongs to the glycosyltransferase 29 family.
     
 0.773
ROHU_030130
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like isoform X3; Belongs to the glycosyltransferase 29 family.
     
 0.738
ROHU_012956
Polypeptide N-acetylgalactosaminyltransferase.
   
0.608
ROHU_034327
Beta-1,3-galactosyl-O-glycosyl-glyco beta-1,6-N-acetylglucosaminyltransferase 3-like protein.
     
 0.550
ROHU_034325
Beta-1,3-galactosyl-O-glycosyl-glyco beta-1,6-N-acetylglucosaminyltransferase 3-like protein.
     
 0.550
ROHU_030098
Beta-1,3-galactosyl-O-glycosyl-glyco beta-1,6-N-acetylglucosaminyltransferase 3-like protein.
     
 0.550
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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