STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_01923728S ribosomal mitochondrial. (364 aa)    
Predicted Functional Partners:
ROHU_010101
28S ribosomal mitochondrial-like protein.
   
 0.999
ROHU_018178
28S ribosomal mitochondrial.
   
 0.999
ROHU_011666
28S ribosomal mitochondrial.
    
 0.998
ROHU_023428
Mitochondrial 28S ribosomal S28.
   
  0.998
ROHU_022572
Pentatricopeptide repeat domain-containing mitochondrial.
   
 0.998
ROHU_016492
28S ribosomal mitochondrial-like protein.
   
  0.998
ROHU_015507
28S ribosomal mitochondrial.
   
 0.998
ROHU_014630
28S ribosomal mitochondrial.
   
  0.997
ROHU_028638
28S ribosomal mitochondrial.
   
 0.997
ROHU_030128
Nucleoside diphosphate kinase.
   
 0.997
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.