STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_019386Cytoplasmic dynein 2 light intermediate chain 1. (345 aa)    
Predicted Functional Partners:
ROHU_025192
LRR and PYD domains-containing 3-like protein.
    
 0.982
ROHU_016958
Dynein light chain.
    
 0.961
ROHU_010072
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
   
 
0.943
ROHU_020799
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
   
 
 0.943
ROHU_032535
Cytoplasmic dynein 1 intermediate chain 2 isoform X4.
    
 0.941
ROHU_000344
Cytoplasmic dynein 1 intermediate chain 2-like isoform X1.
    
 0.941
ROHU_005913
Nuclear body protein SP140 isoform X1.
    
 0.931
ROHU_011664
Dynein light chain Tctex-type 1.
    
 0.930
ROHU_009588
Tctex1 domain-containing 2.
   
 0.928
ROHU_015174
Dynein light chain Tctex-type 3.
    
 0.928
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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