STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_018110Potassium voltage-gated channel subfamily C member 1-like isoform X2; Belongs to the potassium channel family. (604 aa)    
Predicted Functional Partners:
ROHU_012163
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.919
ROHU_023976
60S ribosomal L35.
  
 0.819
ROHU_027421
60S ribosomal L24.
  
 0.815
ROHU_026913
60S ribosomal L31.
   
 0.815
ROHU_026488
60S ribosomal L32.
  
 0.815
ROHU_000696
60S ribosomal L30.
   
 0.815
ROHU_002989
60S ribosomal L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.814
ROHU_009309
60S acidic ribosomal P2-like protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.804
ROHU_028436
60S ribosomal L5.
  
 0.798
ROHU_018359
60S ribosomal L36a; Belongs to the eukaryotic ribosomal protein eL42 family.
  
 0.797
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.