STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_018195Carbohydrate sulfotransferase 15. (524 aa)    
Predicted Functional Partners:
ROHU_026163
Stromal interaction molecule 2-like protein.
   
 0.633
ROHU_021964
AN1-type zinc finger 4.
    
 0.633
ROHU_014231
Recombining binding suppressor of hairless isoform X1.
   
 0.633
ROHU_035538
E3 SUMO-ligase 2-like protein.
   
 0.630
ROHU_010858
E3 SUMO-ligase 2-like isoform X1; Belongs to the small heat shock protein (HSP20) family.
   
 0.630
ROHU_010859
E3 SUMO-ligase 2-like protein.
   
 0.630
ROHU_026916
E3 SUMO-ligase 2-like protein.
   
 0.630
ROHU_036781
E3 SUMO-ligase 2-like isoform X2.
   
 0.630
ROHU_023956
E3 SUMO-ligase 2-like isoform X2.
   
 0.630
ROHU_003568
E3 SUMO-ligase 2-like protein.
   
 0.630
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.