STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_017474Guanine nucleotide-binding subunit beta 1 isoform X3. (158 aa)    
Predicted Functional Partners:
ROHU_001096
Mitotic spindle assembly checkpoint MAD2A.
   
 0.769
ROHU_012428
Mitotic checkpoint serine threonine-kinase BUB1-like protein.
   
 0.754
ROHU_018629
Cell division cycle 16-like protein.
   
 0.750
ROHU_012847
Transcription initiation factor TFIID subunit 12.
   
 0.744
ROHU_028654
Transcription initiation factor TFIID subunit 9-like protein.
    
 0.743
ROHU_018491
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.742
ROHU_010455
Transcription initiation factor TFIID subunit 2.
    
 0.740
ROHU_005298
Transcription initiation factor TFIID subunit.
   
 0.733
ROHU_035675
WD repeat-containing 19 isoform X2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
    
 0.730
ROHU_005529
Aryl-hydrocarbon-interacting-like 1.
    
 0.729
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.