STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_017407Uridine-cytidine kinase; Belongs to the uridine kinase family. (508 aa)    
Predicted Functional Partners:
ROHU_018350
Uracil phosphoribosyltransferase-like protein.
  
0.970
ROHU_035297
Membrane-associated guanylate WW and PDZ domain-containing 3-like protein.
   
 0.915
ROHU_011314
Membrane-associated guanylate WW and PDZ domain-containing 3-like isoform X1.
   
 0.915
ROHU_023017
Membrane-associated guanylate WW and PDZ domain-containing 1-like isoform X1.
   
 0.915
ROHU_018552
Membrane-associated guanylate WW and PDZ domain-containing 1-like isoform X1.
   
 0.915
ROHU_014266
Cytidine deaminase-like protein.
    
 0.873
ROHU_027281
Adenylate kinase 9 isoform X1.
    
 0.863
ROHU_032895
Adenylate kinase 9 isoform X1.
    
 0.863
ROHU_027280
Adenylate kinase 9 isoform X1.
    
 0.863
ROHU_015251
Bifunctional epoxide hydrolase 2.
  
 
 0.861
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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