STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_017309Complement factor D-like protein; Belongs to the peptidase S1 family. (480 aa)    
Predicted Functional Partners:
ROHU_013263
Macrophage-stimulating receptor-like isoform X1.
    
  0.670
ROHU_007434
Hepatocyte growth factor receptor-like protein.
    
  0.670
ROHU_015043
Macrophage-stimulating receptor-like protein.
    
  0.670
ROHU_014080
Hepatocyte growth factor receptor-like isoform X1.
    
  0.670
ROHU_023910
Inactive tyrosine-kinase 7-like protein.
    
  0.626
ROHU_006108
Inactive tyrosine-kinase 7-like protein.
    
  0.626
ROHU_023907
Inactive tyrosine-kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.626
ROHU_002206
Uncharacterized protein.
    
  0.594
ROHU_001410
Serine protease 27-like protein.
  
     0.537
ROHU_013115
Serine protease 27-like protein; Belongs to the peptidase S1 family.
  
     0.534
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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