STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_017012Sentrin-specific protease 2-like isoform X2. (239 aa)    
Predicted Functional Partners:
ROHU_015581
Small ubiquitin-related modifier 1.
    
 0.917
ROHU_008810
Small ubiquitin-related modifier.
    
 0.890
ROHU_019566
Small ubiquitin-related modifier 2 isoform X2.
    
 0.890
ROHU_030291
Ran GTPase-activating 1-like isoform X1.
    
 
 0.737
ROHU_028948
Sentrin-specific protease 7-like isoform X1.
    
 0.716
ROHU_026109
Sentrin-specific protease 6-like isoform X2.
    
 0.716
ROHU_007028
Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
    
 0.716
ROHU_018721
Sentrin-specific protease 7 isoform X1.
    
 0.716
ROHU_004784
Sentrin-specific protease 7-like isoform X1.
    
 0.716
ROHU_036140
WD repeat-containing 18.
    
 0.701
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.