STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_015809MIS12-like protein. (215 aa)    
Predicted Functional Partners:
ROHU_012976
Kinetochore-associated DSN1-like protein.
    
 0.997
ROHU_036884
Kinetochore Spc24.
   
 0.986
ROHU_014400
Polyamine-modulated factor 1-like protein.
    
 0.985
ROHU_016611
Kinetochore Nuf2 isoform X1.
   
 0.962
ROHU_023181
Kinetochore Spc25-like protein.
    
 0.914
ROHU_003320
Kinetochore Spc25.
    
 0.914
ROHU_013018
DNA repair RAD51-like protein.
   
 0.910
ROHU_012428
Mitotic checkpoint serine threonine-kinase BUB1-like protein.
    
 0.865
ROHU_032522
Cyclic AMP-dependent transcription factor ATF-2.
    
  0.729
ROHU_011723
Cyclic AMP-dependent transcription factor ATF-7-like isoform X1.
    
  0.729
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.