STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_015733REST corepressor 3-like isoform X1. (876 aa)    
Predicted Functional Partners:
ROHU_024836
Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family.
   
 0.970
ROHU_000349
Paired amphipathic helix Sin3a-like protein.
   
 
 0.874
ROHU_026985
PHD finger 21A-like isoform X3.
   
 0.873
ROHU_017323
SWI SNF-related matrix-associated actin-dependent regulator.
   
 0.871
ROHU_009705
Lysine-specific histone demethylase.
   
 0.860
ROHU_009706
Lysine-specific histone demethylase 1B.
   
 0.860
ROHU_025440
Amine oxidase.
    
 0.854
ROHU_007448
Amine oxidase.
    
 0.854
ROHU_018650
Amine oxidase.
    
 0.854
ROHU_018858
RE1-silencing transcription factor-like protein.
    
 0.848
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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