STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_004151Doublesex-and mab-3-related transcription factor 3. (450 aa)    
Predicted Functional Partners:
ROHU_005312
Kaptin.
    
 0.814
ROHU_024237
DEP domain-containing 5-like isoform X2.
   
 0.791
ROHU_021883
Nitrogen permease regulator 2 isoform X2.
    
 0.786
ROHU_035686
SZT2-like isoform X2.
    
 0.772
ROHU_002866
SZT2 isoform X1.
    
 0.772
ROHU_013053
Mitochondrial inner membrane protease subunit 1.
    
 0.743
ROHU_026609
Integrin-alpha FG-GAP repeat-containing 2.
    
 0.743
ROHU_003237
Pollen-specific leucine-rich repeat extensin 1.
    
 0.696
ROHU_004731
WD repeat-containing 24.
    
 0.696
ROHU_006895
WD repeat-containing 24.
    
 0.696
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.