STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_003960Lipopolysaccharide-binding-like isoform X2. (175 aa)    
Predicted Functional Partners:
ROHU_034161
Bactericidal permeability-increasing-like protein.
   
 
  0.556
ROHU_013087
Bactericidal permeability-increasing-like protein.
   
 
 
0.556
ROHU_034531
Bactericidal permeability-increasing-like protein.
   
 
  0.556
ROHU_013088
Bactericidal permeability-increasing-like protein.
   
 
  0.556
ROHU_011136
Bactericidal permeability-increasing-like protein.
   
 
  0.556
ROHU_023962
Bactericidal permeability-increasing-like protein.
   
 
  0.556
ROHU_004807
Bactericidal permeability-increasing-like protein.
   
 
  0.556
ROHU_004806
Bactericidal permeability-increasing-like protein.
   
 
  0.556
ROHU_004805
Bactericidal permeability-increasing-like protein.
   
 
  0.556
ROHU_014198
Bactericidal permeability-increasing-like protein.
   
 
 
0.556
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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