STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_014815C-type mannose receptor 2-like protein. (218 aa)    
Predicted Functional Partners:
ROHU_033364
Proline-serine-threonine phosphatase-interacting 1-like protein.
    
  0.526
ROHU_034127
Proline-serine-threonine phosphatase-interacting 1-like protein.
    
  0.526
ROHU_024738
Tenascin-N isoform X1.
   
  0.468
ROHU_035125
Tenascin-like isoform X4.
    
  0.460
ROHU_035124
Tenascin-like isoform X2.
    
  0.460
ROHU_027130
Tenascin XB.
    
  0.460
ROHU_024739
Tenascin-R isoform X1.
    
  0.460
ROHU_016884
Tenascin-like isoform X1.
    
  0.460
ROHU_016192
Tenascin-like isoform X1.
    
  0.460
ROHU_003571
Tenascin-like protein.
    
  0.460
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.