STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_014409Copper-transporting ATPase 1. (1488 aa)    
Predicted Functional Partners:
ROHU_032322
PDZ domain-containing 11 isoform X1.
    
 0.797
ROHU_006100
Ceruloplasmin; Belongs to the multicopper oxidase family.
  
 
 0.727
ROHU_012466
Hephaestin 1; Belongs to the multicopper oxidase family.
  
 
 0.687
ROHU_006446
Large neutral amino acids transporter small subunit 4-like isoform X1; Belongs to the multicopper oxidase family.
  
 
 0.687
ROHU_033011
Hephaestin 1; Belongs to the multicopper oxidase family.
  
 
 0.687
ROHU_033012
Hephaestin 1; Belongs to the multicopper oxidase family.
  
 
 0.687
ROHU_027961
Hephaestin 1.
  
 
 0.687
ROHU_021310
Hephaestin 1; Belongs to the multicopper oxidase family.
  
 
 0.687
ROHU_021311
Hephaestin 1; Belongs to the multicopper oxidase family.
  
 
 0.687
ROHU_019320
Coagulation factor VIII-like protein; Belongs to the multicopper oxidase family.
  
 
 0.687
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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