STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_003614G2 M phase-specific E3 ubiquitin-ligase-like isoform X1. (511 aa)    
Predicted Functional Partners:
ROHU_018306
Amnionless-like protein.
   
 0.700
ROHU_013263
Macrophage-stimulating receptor-like isoform X1.
    
 0.608
ROHU_007434
Hepatocyte growth factor receptor-like protein.
    
 0.608
ROHU_015043
Macrophage-stimulating receptor-like protein.
    
 0.608
ROHU_014080
Hepatocyte growth factor receptor-like isoform X1.
    
 0.608
ROHU_022099
Tomoregulin-1-like protein.
     
 0.501
ROHU_013336
Vitamin D-binding-like protein.
    
 0.498
ROHU_010128
Vitamin D-binding-like protein.
    
 0.498
ROHU_000333
Synaptojanin-1-like isoform X7.
     
 0.483
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.