STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_003347C-terminal-binding 2 isoform X1. (504 aa)    
Predicted Functional Partners:
ROHU_017638
Phosphoserine aminotransferase.
  
 0.945
ROHU_010768
Phosphoserine phosphatase.
  
 0.826
ROHU_007677
Hydroxyacid oxidase 1.
    
 0.819
ROHU_015662
2-hydroxyacyl-lyase 1; Belongs to the TPP enzyme family.
  
 
 0.812
ROHU_018134
Hydroxymethylglutaryl-mitochondrial-like isoform X1.
  
 
 0.810
ROHU_005579
Malate glyoxysomal-like protein.
    
 0.794
ROHU_015590
Regucalcin.
    
 0.772
ROHU_013271
Glycerate kinase isoform X1.
    
 0.764
ROHU_013507
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.763
ROHU_036275
Serine mitochondrial.
  
 
 0.763
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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