STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROHU_000724Chondroitin sulfate N-acetylgalactosaminyltransferase 1-like protein. (179 aa)    
Predicted Functional Partners:
ROHU_024145
Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family.
    
 0.881
ROHU_027030
Hexosyltransferase.
    
 0.842
ROHU_015522
Hexosyltransferase.
    
 0.842
ROHU_002338
Hexosyltransferase.
    
 
0.832
ROHU_019580
Hexosyltransferase.
    
 0.828
ROHU_007036
Hexosyltransferase.
 
  
 0.804
ROHU_009963
Hexosyltransferase.
    
 0.755
ROHU_009966
Chondroitin sulfate synthase 3.
    
 0.755
ROHU_001790
Chondroitin sulfate synthase 1-like protein.
    
 0.755
ROHU_027727
Carbohydrate sulfotransferase.
     
 0.638
Your Current Organism:
Labeo rohita
NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu
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