STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_18557Partitioning defective 3 like protein B. (147 aa)    
Predicted Functional Partners:
PARD3B
Partitioning defective 3 like protein B.
 
      0.900
UY3_18555
Partitioning defective 3 like protein B.
 
      0.897
UY3_16957
Protein kinase C zeta type; Belongs to the protein kinase superfamily.
    
 0.777
UY3_16045
Partitioning defective 6 like protein beta.
    
 0.604
UY3_13489
Partitioning defective 6 like protein beta.
    
 0.604
PARD6B
Partitioning defective 6 like protein beta.
    
 0.604
UY3_04911
Intraflagellar transport protein 57 like protein.
    
 0.506
IFT80
Intraflagellar transport protein 80 like protein.
    
 0.502
UY3_08009
TRAF3-interacting protein 1.
    
 0.500
CASK
Peripheral plasma membrane protein CASK.
    
 0.495
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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