RPRD1B protein (Chelonia mydas) - STRING interaction network

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

RPRD1B

Regulation of nuclear pre-mRNA domain-containing protein 1B. (72 aa)

Predicted Functional Partners:

UY3_13380

0.795

UY3_10219

0.720

RPAP2

0.678

UY3_08606

0.663

DXO

0.623

TMEM240

0.605

POLR2C

0.602

TCP11L2

0.601

TTL

0.600

UY3_00087

0.589

Your Current Organism:

Chelonia mydas

NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DXO	RPAP2	M7BX26	M7BLL0	Protein Dom3Z.	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.	0.425
DXO	RPRD1B	M7BX26	M7AJD7	Protein Dom3Z.	Regulation of nuclear pre-mRNA domain-containing protein 1B.	0.623
DXO	UY3_10219	M7BX26	M7BX00	Protein Dom3Z.	5'-3' exoribonuclease 2.	0.958
POLR2C	RPAP2	M7B5V7	M7BLL0	DNA-directed RNA polymerase II subunit RPB3.	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.	0.957
POLR2C	RPRD1B	M7B5V7	M7AJD7	DNA-directed RNA polymerase II subunit RPB3.	Regulation of nuclear pre-mRNA domain-containing protein 1B.	0.602
POLR2C	TCP11L2	M7B5V7	M7BNZ6	DNA-directed RNA polymerase II subunit RPB3.	DNA-directed RNA polymerase III subunit RPC2.	0.927
POLR2C	TMEM240	M7B5V7	M7B1K9	DNA-directed RNA polymerase II subunit RPB3.	Transmembrane protein C1orf70.	0.819
POLR2C	TTL	M7B5V7	M7C7K6	DNA-directed RNA polymerase II subunit RPB3.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.941
POLR2C	UY3_00087	M7B5V7	M7CMX3	DNA-directed RNA polymerase II subunit RPB3.	DNA-directed RNA polymerase II subunit RPB4.	0.993
POLR2C	UY3_10219	M7B5V7	M7BX00	DNA-directed RNA polymerase II subunit RPB3.	5'-3' exoribonuclease 2.	0.486
POLR2C	UY3_13380	M7B5V7	M7AVJ4	DNA-directed RNA polymerase II subunit RPB3.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
RPAP2	DXO	M7BLL0	M7BX26	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.	Protein Dom3Z.	0.425
RPAP2	POLR2C	M7BLL0	M7B5V7	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.	DNA-directed RNA polymerase II subunit RPB3.	0.957
RPAP2	RPRD1B	M7BLL0	M7AJD7	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.	Regulation of nuclear pre-mRNA domain-containing protein 1B.	0.678
RPAP2	TCP11L2	M7BLL0	M7BNZ6	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.	DNA-directed RNA polymerase III subunit RPC2.	0.818
RPAP2	TMEM240	M7BLL0	M7B1K9	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.	Transmembrane protein C1orf70.	0.838
RPAP2	TTL	M7BLL0	M7C7K6	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.814
RPAP2	UY3_00087	M7BLL0	M7CMX3	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.	DNA-directed RNA polymerase II subunit RPB4.	0.964
RPAP2	UY3_13380	M7BLL0	M7AVJ4	Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.962
RPRD1B	DXO	M7AJD7	M7BX26	Regulation of nuclear pre-mRNA domain-containing protein 1B.	Protein Dom3Z.	0.623