STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACBD3Protein TMED8. (391 aa)    
Predicted Functional Partners:
PI4KB
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 
 0.955
UY3_11682
Bifunctional aminoacyl-tRNA synthetase.
      
 0.857
BLZF1
Golgin-45.
    
 
 0.784
TSPO
Translocator protein.
      
 0.749
UY3_06297
Src substrate protein p85.
    
 0.747
PPM1L
Protein phosphatase 1L.
   
  
 0.607
UY3_12932
Nuclear inhibitor of protein phosphatase 1.
      
 0.597
UY3_11482
TBC1 domain family member 22A.
    
 
 0.593
OSBP
Oxysterol-binding protein; Belongs to the OSBP family.
   
  
 0.573
UY3_07822
Ankyrin repeat domain-containing protein 42.
    
 0.524
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.