STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_17632Protein FAM48A. (203 aa)    
Predicted Functional Partners:
CCDC101
Sulfotransferase; Belongs to the sulfotransferase 1 family.
    
 0.976
TAF12
Transcription initiation factor TFIID subunit 12.
    
 0.975
SUPT7L
STAGA complex 65 subunit gamma.
    
 0.968
TAF5L
Uncharacterized protein.
    
 0.966
SUPT3H
Transcription initiation protein SPT3 like protein.
    
 0.963
TADA3
Transcriptional adapter 3.
    
 0.962
UY3_12848
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.960
UY3_12270
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.959
UY3_08380
Transcriptional adapter 1.
    
 0.955
TUT1
RRM domain-containing protein.
    
 0.951
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.