STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COPS6COP9 signalosome complex subunit 6. (252 aa)    
Predicted Functional Partners:
COPS8
COP9 signalosome complex subunit 8.
   
 0.998
UY3_12502
COP9 signalosome complex subunit 4.
   
 0.996
COPS5
COP9 signalosome complex subunit 5.
   
 0.995
GPS1
COP9 signalosome complex subunit 1.
   
 0.995
COPS7B
COP9 signalosome complex subunit 7b.
    
 0.980
UY3_08560
COP9 signalosome complex subunit 7a.
    
 0.980
UY3_13086
Leucine-rich repeat-containing protein 67.
   
 0.967
UY3_19096
Cullin-2; Belongs to the cullin family.
    
 0.889
UY3_00887
RING-box protein 1.
   
 0.882
PSMD13
26S proteasome non-ATPase regulatory subunit 13.
   
 0.871
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.