STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCARA5Scavenger receptor class A member 5. (62 aa)    
Predicted Functional Partners:
TAPBP
Tapasin.
   
 0.713
GUK1
Guanylate kinase.
    
 0.648
MMACHC
Methylmalonic aciduria and homocystinuria type C protein like protein.
      
 0.626
RNF146
Uncharacterized protein.
   
  
 0.618
UY3_17648
Olfactomedin.
      
 0.564
MRPL55
39S ribosomal protein L55.
      
 0.559
IL34
Interleukin-34.
      
 0.549
UY3_16339
Death domain-associated protein 6.
   
 0.530
CALR
Calreticulin.
   
 0.521
UY3_04176
Serine palmitoyltransferase 1.
      
 0.512
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.