ZHX1 protein (Chelonia mydas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ZHX1

Zinc fingers and homeoboxes protein 1. (871 aa)

Predicted Functional Partners:

TIMM22

0.709

TBC1D31

0.697

SDHD

0.609

TIMM10

0.596

TIMM10B

0.592

UY3_10569

0.562

UY3_10182

0.440

Claudin-22

0.407

Your Current Organism:

Chelonia mydas

NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Claudin-22	ZHX1	M7BZP8	M7ALK7	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family.	Zinc fingers and homeoboxes protein 1.	0.407
SDHD	TIMM10	M7BHM3	M7BI33	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.	Mitochondrial import inner membrane translocase subunit Tim10.	0.801
SDHD	TIMM10B	M7BHM3	M7AX10	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.	Mitochondrial import inner membrane translocase subunit Tim9 B.	0.800
SDHD	TIMM22	M7BHM3	M7BKN7	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.	Mitochondrial import inner membrane translocase subunit Tim22.	0.896
SDHD	ZHX1	M7BHM3	M7ALK7	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.	Zinc fingers and homeoboxes protein 1.	0.609
TBC1D31	ZHX1	M7AZW8	M7ALK7	WD repeat-containing protein 67.	Zinc fingers and homeoboxes protein 1.	0.697
TIMM10	SDHD	M7BI33	M7BHM3	Mitochondrial import inner membrane translocase subunit Tim10.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.	0.801
TIMM10	TIMM10B	M7BI33	M7AX10	Mitochondrial import inner membrane translocase subunit Tim10.	Mitochondrial import inner membrane translocase subunit Tim9 B.	0.998
TIMM10	TIMM22	M7BI33	M7BKN7	Mitochondrial import inner membrane translocase subunit Tim10.	Mitochondrial import inner membrane translocase subunit Tim22.	0.984
TIMM10	ZHX1	M7BI33	M7ALK7	Mitochondrial import inner membrane translocase subunit Tim10.	Zinc fingers and homeoboxes protein 1.	0.596
TIMM10B	SDHD	M7AX10	M7BHM3	Mitochondrial import inner membrane translocase subunit Tim9 B.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.	0.800
TIMM10B	TIMM10	M7AX10	M7BI33	Mitochondrial import inner membrane translocase subunit Tim9 B.	Mitochondrial import inner membrane translocase subunit Tim10.	0.998
TIMM10B	TIMM22	M7AX10	M7BKN7	Mitochondrial import inner membrane translocase subunit Tim9 B.	Mitochondrial import inner membrane translocase subunit Tim22.	0.982
TIMM10B	ZHX1	M7AX10	M7ALK7	Mitochondrial import inner membrane translocase subunit Tim9 B.	Zinc fingers and homeoboxes protein 1.	0.592
TIMM22	SDHD	M7BKN7	M7BHM3	Mitochondrial import inner membrane translocase subunit Tim22.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.	0.896
TIMM22	TIMM10	M7BKN7	M7BI33	Mitochondrial import inner membrane translocase subunit Tim22.	Mitochondrial import inner membrane translocase subunit Tim10.	0.984
TIMM22	TIMM10B	M7BKN7	M7AX10	Mitochondrial import inner membrane translocase subunit Tim22.	Mitochondrial import inner membrane translocase subunit Tim9 B.	0.982
TIMM22	ZHX1	M7BKN7	M7ALK7	Mitochondrial import inner membrane translocase subunit Tim22.	Zinc fingers and homeoboxes protein 1.	0.709
UY3_10182	ZHX1	M7BX48	M7ALK7	Uncharacterized protein.	Zinc fingers and homeoboxes protein 1.	0.440
UY3_10569	ZHX1	M7BW76	M7ALK7	Nuclear transcription factor Y subunit alpha.	Zinc fingers and homeoboxes protein 1.	0.562