STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_18747YjeF N-terminal domain-containing protein 3. (119 aa)    
Predicted Functional Partners:
DCP2
mRNA-decapping enzyme 2.
  
 0.962
DDX6
Putative ATP-dependent RNA helicase DDX6.
   
 0.961
UY3_17562
mRNA-decapping enzyme 1B.
   
 0.958
UY3_03871
Protein PAT1 like protein 2.
    
 0.875
NAXD
Carbohydrate kinase domain-containing protein.
  
 
 0.871
EDC4
Enhancer of mRNA-decapping protein 4.
   
 0.825
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.781
NUDT14
Uridine diphosphate glucose pyrophosphatase.
  
 0.744
NUDT8
Nucleoside diphosphate-linked moiety X motif 8.
  
 0.741
NUDT2
Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical].
  
 0.741
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.