STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COPS7BCOP9 signalosome complex subunit 7b. (264 aa)    
Predicted Functional Partners:
UY3_12502
COP9 signalosome complex subunit 4.
   
 0.981
COPS6
COP9 signalosome complex subunit 6.
    
 0.980
COPS5
COP9 signalosome complex subunit 5.
    
 0.980
COPS8
COP9 signalosome complex subunit 8.
    
 0.979
GPS1
COP9 signalosome complex subunit 1.
   
 0.979
UY3_13086
Leucine-rich repeat-containing protein 67.
    
 0.876
UY3_08560
COP9 signalosome complex subunit 7a.
  
 
0.871
UY3_00887
RING-box protein 1.
   
 0.836
UY3_01806
DNA damage-binding protein 2.
    
 0.800
LAMP2
Cullin-4B; Belongs to the cullin family.
    
 0.756
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.