STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_18232UPF0544 protein C5orf45. (388 aa)    
Predicted Functional Partners:
RPS6
40S ribosomal protein S6.
  
 0.999
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.999
UY3_02152
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.999
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.998
UY3_17440
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family.
  
 0.998
RPS25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.998
UY3_11253
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.998
UY3_14164
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.998
UY3_03089
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.998
RPS20
40S ribosomal protein S20.
   
 0.998
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.