STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_17741Methyltransf_11 domain-containing protein. (182 aa)    
Predicted Functional Partners:
MRPS5
28S ribosomal protein S5.
    
 0.563
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.488
UY3_11253
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.488
TSR1
Pre-rRNA-processing protein TSR1 like protein.
   
  0.478
UY3_12057
Bystin.
   
 0.459
UY3_14164
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.458
RPS6
40S ribosomal protein S6.
   
  0.455
RPS8
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.448
UY3_03089
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.447
UY3_03653
40S ribosomal protein S4.
   
  0.446
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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