STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_17672Apolipoprotein A-IV. (206 aa)    
Predicted Functional Partners:
APOB
Vitellogenin domain-containing protein.
   
 0.907
UY3_16026
Phosphatidylcholine-sterol acyltransferase.
   
 0.864
UY3_17673
Apolipoprotein Eb.
   
 0.777
UY3_05454
VWFD domain-containing protein.
   
 0.775
UY3_05455
Uncharacterized protein.
   
 0.775
UY3_16405
Scavenger receptor class B member 1; Belongs to the CD36 family.
    
 0.759
UY3_14621
Phospholipid transfer protein.
   
 0.723
SSX2IP
Vitellogenin-2.
   
 0.688
UY3_15524
Vitellogenin-2.
   
 0.688
UY3_12582
Vitellogenin-1.
   
 0.688
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.