STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSFVesicle-fusing ATPase. (716 aa)    
Predicted Functional Partners:
UY3_15558
Beta-soluble NSF attachment protein.
   
 0.986
UY3_14354
Synaptobrevin like protein YKT6-B; Belongs to the synaptobrevin family.
    
 0.953
UBXN7
UBX domain-containing protein 7.
   
 0.945
UY3_09413
Gamma-soluble NSF attachment protein.
   
 0.917
UY3_15825
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 
 0.910
STX5
Syntaxin-5; Belongs to the syntaxin family.
    
 0.900
VTI1B
Vesicle transport through interaction with t-SNAREs like protein 1B.
   
 0.893
UY3_10662
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.889
UY3_16136
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.889
STX12
Syntaxin-12; Belongs to the syntaxin family.
   
 0.880
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.