STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_14452Importin subunit alpha; Belongs to the importin alpha family. (494 aa)    
Predicted Functional Partners:
KPNB1
Importin subunit beta-1.
   
 0.857
UY3_02136
E3 SUMO-protein ligase RanBP2.
   
 
 0.665
RPGR
X-linked retinitis pigmentosa GTPase regulator.
   
 
 0.662
UY3_06984
Exportin-2.
   
 
 0.644
UY3_08545
Importin subunit alpha-1.
  
 
0.603
UY3_02466
G_PROTEIN_RECEP_F2_4 domain-containing protein.
   
 
 0.581
UY3_02374
Uncharacterized protein.
   
 
 0.573
NUP50
Nuclear pore complex protein Nup50.
   
 
 0.561
RANBP1
Ran-specific GTPase-activating protein.
   
 
 0.556
STAT4
Signal transducer and activator of transcription 4.
    
 0.534
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.