STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_16774Pumilio like protein 2. (1127 aa)    
Predicted Functional Partners:
GAK
Cyclin-G-associated kinase.
   
 0.879
NANOS2
Nanos like protein 2; Belongs to the nanos family.
   
 
 0.837
NANOS3
Nanos like protein 3; Belongs to the nanos family.
   
 
 0.719
UY3_05744
Clathrin interactor 1.
   
 
 0.650
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 
 0.646
CNOT8
CCR4-NOT transcription complex subunit 8.
    
 
 0.636
DDX6
Putative ATP-dependent RNA helicase DDX6.
   
 
 0.535
EIF4E3
Eukaryotic translation initiation factor 4E type 3.
    
 
 0.531
YARS
Tyrosine--tRNA ligase.
    
 
 0.513
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
    
 
 0.513
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.