STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_14171Ganglioside-induced differentiation-associated protein 1-like 1. (322 aa)    
Predicted Functional Partners:
UY3_17583
Peroxisomal membrane protein PEX16.
     
 0.662
PEX19
Peroxisomal biogenesis factor 19.
     
 0.633
UY3_03849
ATP-binding cassette sub-family D member 2.
     
 0.587
UY3_03684
Peroxisomal biogenesis factor 3.
     
 0.587
UY3_10743
DUF4097 domain-containing protein.
     
 0.579
PEX12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.579
UY3_00883
Peroxisomal membrane protein PMP34; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 
  0.572
PEX13
Peroxisomal membrane protein PEX13.
     
 0.563
ATAD1
ATPase family AAA domain-containing protein 1; Belongs to the AAA ATPase family.
     
 0.525
UY3_13224
ATPase family AAA domain-containing protein 1-A.
     
 0.525
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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