STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC189Coiled-coil domain-containing protein C16orf93 like protein. (270 aa)    
Predicted Functional Partners:
UY3_03365
Leucine-rich repeat and guanylate kinase domain-containing protein.
    
 
 0.754
UY3_14724
Sperm-associated antigen 17.
    
 
 0.523
UY3_14723
Sperm-associated antigen 17.
    
 
 0.523
UY3_16959
Uncharacterized protein.
    
 
 0.512
UY3_04445
Primary ciliary dyskinesia protein 1.
    
 
 0.512
POLR3C
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.507
TMED6
Transmembrane emp24 domain-containing protein 6.
      
 0.476
UY3_05811
Armadillo repeat-containing protein 3.
      
 0.422
ARMC3
Armadillo repeat-containing protein 3.
      
 0.422
UY3_11883
Adenylate kinase 7.
    
 
 0.413
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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