STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKR7A2Aflatoxin B1 aldehyde reductase member 2. (258 aa)    
Predicted Functional Partners:
UY3_17811
Nucleoporin_C domain-containing protein.
   
 0.792
UY3_12673
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.785
UY3_07196
Protein SEC13 like protein; Belongs to the WD repeat SEC13 family.
    
 0.782
SEH1L
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
    
 0.733
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.723
UBR4
E3 ubiquitin-protein ligase UBR4.
     
 0.695
UY3_14614
Nuclear receptor coactivator 5.
    
 0.678
NUP98
Nuclear pore complex protein Nup98-Nup96.
    
 0.678
UY3_06902
Nuclear receptor coactivator 5.
    
 0.678
KCNH5
Potassium voltage-gated channel subfamily H member 5.
    
 0.614
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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