STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_14427Ataxin-7-like protein 2. (1041 aa)    
Predicted Functional Partners:
UY3_09797
Ubiquitin carboxyl-terminal hydrolase 22-A; Belongs to the peptidase C19 family.
    
 0.897
UY3_02729
Transcription initiation factor TFIID subunit 9.
    
 0.896
UY3_12848
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.895
TADA3
Transcriptional adapter 3.
    
 0.894
UY3_12270
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.891
TAF12
Transcription initiation factor TFIID subunit 12.
   
 0.846
TUT1
RRM domain-containing protein.
   
 0.845
TAF5L
Uncharacterized protein.
    
 0.824
CCDC101
Sulfotransferase; Belongs to the sulfotransferase 1 family.
    
 0.819
TADA2B
Transcriptional adapter.
    
 0.819
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.