STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_13565Fanconi anemia group M protein. (1915 aa)    
Predicted Functional Partners:
MUS81
Crossover junction endonuclease MUS81.
    
 0.997
RPA1
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
    
 0.996
UY3_00832
E3 ubiquitin-protein ligase FANCL.
    
 0.996
UY3_17290
Fanconi anemia group B protein.
   
 0.995
UY3_16742
DNA excision repair protein ERCC-1.
   
 0.995
UY3_09899
Werner syndrome ATP-dependent helicase.
   
 0.995
UY3_14778
Fanconi anemia group F protein.
    
 0.995
FAAP24
Fanconi anemia-associated protein of 24 kDa.
   
 0.995
UY3_10545
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
 0.994
UY3_00780
Fanconi anemia group A protein.
    
0.993
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.