STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCL7BB-cell CLL/lymphoma 7 protein family member B. (235 aa)    
Predicted Functional Partners:
SS18
Protein SSXT.
    
 
 0.705
BRD7
Bromodomain-containing protein 7.
   
 
 0.626
BCL11A
B-cell lymphoma/leukemia 11A.
      
 0.589
PBRM1
Protein polybromo-1.
    
 
 0.581
UY3_06211
Bromodomain-containing protein 9.
   
 
 0.563
ARID1B
AT-rich interactive domain-containing protein 1B.
    
 
 0.529
MMP11
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
   
 
 0.517
WDR53
WD repeat-containing protein 53.
      
 0.487
CC2D1A
Coiled-coil and C2 domain-containing protein 1A.
      
 0.487
BAZ1B
Tyrosine-protein kinase BAZ1B.
      
 0.481
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.