STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHAF1AChromatin assembly factor 1 subunit A. (914 aa)    
Predicted Functional Partners:
UY3_16881
Histone chaperone asf1b.
   
 
 0.777
RBBP7
Histone-binding protein RBBP7.
   
 
 0.764
RBBP4
Histone-binding protein RBBP4.
   
 
 0.764
UY3_12361
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.725
HMOX1
DNA helicase; Belongs to the MCM family.
   
  
 0.718
UY3_16477
Histone chaperone ASF1.
   
 
 0.714
MCM3
DNA helicase; Belongs to the MCM family.
   
  
 0.708
MCM2
DNA helicase; Belongs to the MCM family.
   
 
 0.706
UY3_17460
WD repeat-containing protein 73.
   
 
 0.680
UY3_11353
Histone chaperone ASF1A.
   
 
 0.677
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.