STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZDBF2DBF4-type zinc finger-containing protein 2. (595 aa)    
Predicted Functional Partners:
LGI2
Leucine-rich repeat LGI family member 2.
     
 0.613
LGI1
Leucine-rich glioma-inactivated protein 1.
     
 0.495
UY3_04194
Sentrin-specific protease 6.
    
   0.482
UY3_13518
Disks large like protein 1.
   
 0.446
DLG3
Disks large like protein 3; Belongs to the MAGUK family.
   
 0.446
DLG2
Disks large like protein 2.
   
 0.446
LGI3
Leucine-rich repeat LGI family member 3.
     
 0.442
UY3_17183
Protein kinase domain-containing protein.
      
 0.441
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.