STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_12792DUF667 domain-containing protein. (581 aa)    
Predicted Functional Partners:
PACRG
Parkin coregulated gene protein.
    
 
 0.727
ENKUR
Enkurin.
    
 
 0.679
UY3_11418
EF-hand domain-containing family member C2.
    
 
 0.599
EFHC1
EF-hand domain-containing protein 1.
    
 
 0.599
UY3_02590
Mitochondrial Rho GTPase 1.
   
 
 0.532
UY3_00800
EF-hand domain-containing family member B.
    
   0.529
EFHB
EF-hand domain-containing family member B.
    
   0.529
DENND2C
DENN domain-containing protein 2C.
      
 0.504
UY3_00504
AP-2 complex subunit alpha-1.
      
 0.483
UY3_11923
Urokinase-type plasminogen activator.
    
 
 0.482
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.