STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UY3_13038Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily. (336 aa)    
Predicted Functional Partners:
TM4SF1
Ceruloplasmin; Belongs to the multicopper oxidase family.
    
 0.676
UY3_06678
Hephaestin-like protein 1; Belongs to the multicopper oxidase family.
    
 0.626
HEPH
Hephaestin; Belongs to the multicopper oxidase family.
    
 0.626
UY3_08760
Coagulation factor V; Belongs to the multicopper oxidase family.
    
 0.555
UY3_03637
Coagulation factor VIII.
    
 0.555
SLC11A2
Natural resistance-associated macrophage protein 2.
      
 0.442
UY3_03993
Cytochrome b reductase 1.
      
 0.431
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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