STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETD5SET domain-containing protein 5. (1539 aa)    
Predicted Functional Partners:
UY3_13565
Fanconi anemia group M protein.
    
0.759
UY3_07191
THUMP domain-containing protein 3.
     
 0.596
UY3_15956
E3 ubiquitin-protein ligase HUWE1.
   
   0.503
SETD2
Histone-lysine N-methyltransferase SETD2.
   
0.487
PTRH2
Peptidyl-tRNA hydrolase 2.
      
 0.481
EPHX4
Uncharacterized protein.
      
 0.481
UY3_00890
Uncharacterized protein.
   
 0.478
UY3_14099
Uncharacterized protein.
      
 0.477
NUDT13
Nucleoside diphosphate-linked moiety X motif 13.
      
 0.477
ZC3H15
Zinc finger CCCH domain-containing protein 15.
      
 0.465
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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