STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOMM40Mitochondrial import receptor subunit TOM40 like protein. (337 aa)    
Predicted Functional Partners:
TOMM20
Mitochondrial import receptor subunit TOM20 like protein.
   
 0.918
TOMM22
Mitochondrial import receptor subunit TOM22 like protein.
   
 0.911
SAMM50
Sorting and assembly machinery component 50 like protein.
    
 0.879
UY3_19127
Mitochondrial import inner membrane translocase subunit TIM50.
   
 0.815
UY3_12173
Uncharacterized protein.
   
 0.781
UY3_14900
Metaxin-1.
   
 0.780
MTX3
Metaxin-3.
   
 0.780
VDAC3
Voltage-dependent anion-selective channel protein 3.
    
 0.662
UY3_14403
Voltage-dependent anion-selective channel protein 2.
    
 0.662
VDAC1
Voltage-dependent anion-selective channel protein 1.
    
 0.662
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.