STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNOT9Cell differentiation protein RCD1 like protein. (302 aa)    
Predicted Functional Partners:
CNOT4
CCR4-NOT transcription complex subunit 4.
    
 0.995
UY3_17370
CCR4-NOT transcription complex subunit 3.
    
 0.990
UY3_02304
CCR4-NOT transcription complex subunit 2.
    
 0.990
CNOT11
UPF0760 protein C2orf29.
    
 0.980
CNOT7
CCR4-NOT transcription complex subunit 7.
   
 0.980
CNOT8
CCR4-NOT transcription complex subunit 8.
   
 0.975
UY3_14113
CCR4-NOT transcription complex subunit 10.
    
 0.971
SKIV2L2
Superkiller viralicidic activity 2-like 2.
   
 
 0.903
CNOT6
CCR4-NOT transcription complex subunit 6.
    
 0.853
NOCT
Nocturnin.
    
 0.853
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.