STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GALNTL6Polypeptide N-acetylgalactosaminyltransferase. (426 aa)    
Predicted Functional Partners:
C1GALT1C1
C1GALT1-specific chaperone 1.
     
 0.913
UY3_00037
Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B.
     
 0.912
GCNT1
Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase.
    
 0.906
UY3_06001
Putative polypeptide N-acetylgalactosaminyltransferase-like protein 4.
 
 
  0.565
GALNT7
Polypeptide N-acetylgalactosaminyltransferase.
  
0.519
UY3_13532
Mucin-2.
   
 0.515
LMAN2L
VIP36-like protein.
      
 0.483
UY3_09267
Oxysterol-binding protein-related protein 9.
      
 0.477
UY3_01035
C2H2-type domain-containing protein.
      
 0.434
GFM2
Ribosome-releasing factor 2, mitochondrial; Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.
      
 0.416
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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