LIN52 protein (Chelonia mydas) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

LIN52

Protein lin-52 like protein. (97 aa)

Predicted Functional Partners:

UY3_18467

0.993

MYBL2

0.992

LIN54

0.988

RBBP4

0.983

UY3_13017

0.977

UY3_01514

0.958

UY3_04136

0.953

UY3_16030

0.841

TFDP1

0.839

RB1

0.838

Your Current Organism:

Chelonia mydas

NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LIN52	LIN54	M7B0Z8	M7B4F6	Protein lin-52 like protein.	Protein lin-54 like protein.	0.988
LIN52	MYBL2	M7B0Z8	M7C1G5	Protein lin-52 like protein.	Myb-related protein B.	0.992
LIN52	RB1	M7B0Z8	M7BA28	Protein lin-52 like protein.	Retinoblastoma-associated protein.	0.838
LIN52	RBBP4	M7B0Z8	M7B8E0	Protein lin-52 like protein.	Histone-binding protein RBBP4.	0.983
LIN52	TFDP1	M7B0Z8	M7B4M5	Protein lin-52 like protein.	Transcription factor Dp-1.	0.839
LIN52	UY3_01514	M7B0Z8	M7C9H0	Protein lin-52 like protein.	Retinoblastoma-like protein 2.	0.958
LIN52	UY3_04136	M7B0Z8	M7BSC3	Protein lin-52 like protein.	Tesmin.	0.953
LIN52	UY3_13017	M7B0Z8	M7B328	Protein lin-52 like protein.	Protein lin-37 like protein.	0.977
LIN52	UY3_16030	M7B0Z8	M7AV50	Protein lin-52 like protein.	Transcription factor E2F4.	0.841
LIN52	UY3_18467	M7B0Z8	M7B8F1	Protein lin-52 like protein.	Protein lin-9 like protein.	0.993
LIN54	LIN52	M7B4F6	M7B0Z8	Protein lin-54 like protein.	Protein lin-52 like protein.	0.988
LIN54	MYBL2	M7B4F6	M7C1G5	Protein lin-54 like protein.	Myb-related protein B.	0.964
LIN54	RB1	M7B4F6	M7BA28	Protein lin-54 like protein.	Retinoblastoma-associated protein.	0.671
LIN54	RBBP4	M7B4F6	M7B8E0	Protein lin-54 like protein.	Histone-binding protein RBBP4.	0.981
LIN54	TFDP1	M7B4F6	M7B4M5	Protein lin-54 like protein.	Transcription factor Dp-1.	0.791
LIN54	UY3_01514	M7B4F6	M7C9H0	Protein lin-54 like protein.	Retinoblastoma-like protein 2.	0.854
LIN54	UY3_13017	M7B4F6	M7B328	Protein lin-54 like protein.	Protein lin-37 like protein.	0.892
LIN54	UY3_16030	M7B4F6	M7AV50	Protein lin-54 like protein.	Transcription factor E2F4.	0.821
LIN54	UY3_18467	M7B4F6	M7B8F1	Protein lin-54 like protein.	Protein lin-9 like protein.	0.906
MYBL2	LIN52	M7C1G5	M7B0Z8	Myb-related protein B.	Protein lin-52 like protein.	0.992