STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMD1LIM domain-containing protein 1. (623 aa)    
Predicted Functional Partners:
HAUS3
HAUS augmin-like complex subunit 3.
   
 0.751
UY3_02643
HAUS augmin-like complex subunit 1.
   
 0.742
UY3_04432
Serine/threonine-protein kinase LATS1.
    
 
 0.670
EGLN3
Egl nine like protein 1.
    
 0.649
VHL
Von Hippel-Lindau disease tumor suppressor.
    
 0.636
UY3_03723
Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein.
    
 
 0.629
UY3_02652
HAUS augmin-like complex subunit 5.
   
 0.627
UY3_02133
RNA-binding protein 42.
   
 0.627
LATS2
Non-specific serine/threonine protein kinase.
    
 
 0.599
UY3_19096
Cullin-2; Belongs to the cullin family.
     
 0.580
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.