STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCG2ATP-binding cassette sub-family G member 2. (1124 aa)    
Predicted Functional Partners:
UY3_00154
ATP-binding cassette sub-family G member 5.
   
0.852
UY3_06362
Canalicular multispecific organic anion transporter 1.
  
 0.800
ABCF2
Histone H2B; Belongs to the histone H2B family.
      
 0.699
ABCB7
ATP-binding cassette sub-family B member 7.
    
 0.660
ABCC12
Multidrug resistance-associated protein 9.
  
 0.604
UY3_04010
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.533
ATP5A1
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.518
TAF3
ATP synthase subunit gamma.
   
   0.496
UY3_17671
Apolipoprotein A-IV.
   
 0.465
UY3_17672
Apolipoprotein A-IV.
   
 0.465
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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